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No , I've not had the eprom flashed, just not sure what I would want changed.     I know that blow thru would allow me to vent, but I'm too old for rice, why do you like it?
There are a ton of other advantages to running blow-thru aside from being able to vent the BOV.  Since the MAF is located up near the throttle body, you can blow off an IC pipe and the car will still run (unless you blow off the one between the MAF and the TB).  It also improves airflow in your intake pipe since you don't have a MAF in front of the turbo anymore, and IMO improves throttle response dramatically.  There's honestly no reason not to do it.
If you're gonna have the EPROM flashed the most obvious things you'd wanna do are increased rev limiter, fuel cut elimination, injector compensation, phantom knock elimination etc, etc.  You can discuss it with Jeff O. to custom tailor a chip to your needs.  The things he can do to your EPROM are virtually limitless.